Wednesday, April 16, 2008

Seed: Out of the Blue

The article referred to in the link below describes how Blue Brain works.  If the author's belief that the human brain can be made from a scaled up version of the virtual synapses we have now then we only wait for the arrival of much more powerful computers.  Many experts point to around the year 2020. 

 

 

Seed: Out of the Blue 

In fact, the model is so successful that its biggest restrictions are now technological. "We have already shown that the model can scale up," Markram says. "What is holding us back now are the computers." The numbers speak for themselves. Markram estimates that in order to accurately simulate the trillion synapses in the human brain, you'd need to be able to process about 500 petabytes of data (peta being a million billion, or 10 to the fifteenth power). That's about 200 times more information than is stored on all of Google's servers. (Given current technology, a machine capable of such power would be the size of several football fields.) Energy consumption is another huge problem. The human brain requires about 25 watts of electricity to operate. Markram estimates that simulating the brain on a supercomputer with existing microchips would generate an annual electrical bill of about $3 billion . But if computing speeds continue to develop at their current exponential pace, and energy efficiency improves, Markram believes that he'll be able to model a complete human brain on a single machine in ten years or less.

Seed: Out of the Blue

 

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Tuesday, April 15, 2008

Seed: Suspending Life

 

We mammals, who evolved from the creatures that survived this inhospitable time, were marked by what happened. All animals bear the physiological scars left by the past greenhouse extinctions and hydrogen sulfide events, and we mammals are no exception. The difficulty is knowing where to look for the scars.

I believe the work of Mark Roth and his group may have finally uncovered the survival mechanism of our ancestors. While high levels of H2S kill mammals, Roth's team has found that very low levels of the toxin can prolong their lives. H2S reduces oxygen levels in the body, and though too much causes death by oxygen starvation, a bit less slows a creature's metabolism. This alone is an amazing finding. But Roth has gone further, inducing suspended animation in mammals. By exposing lab mice to small doses of H2S, Roth and his team can put them into the deepest of sleeps--with very slow, or even no heartbeats--for several hours. In that time, the mice can be cooled to temperatures that would have killed them prior to the H2S exposure.

Roth has already begun testing his work on other mammals. If he is correct, hydrogen sulfide may provide a way of saving lives so revolutionary that it will change trauma medicine forever. He is redefining what we thought we knew about death and dying. Death may not be as final as we think.

When we humans are cut or injured, our bodies naturally produce small quantities of hydrogen sulfide. In essence, the body may be trying to put itself into suspended animation to survive the injury, an instinct held over millions of years in our genes. Yet whenever one of us is dying, say from a heart attack, our first instinct is to give that person oxygen. The problem with this "life-saving" first response may be that the oxygenated red blood cells rush to the damaged cells and act like gasoline on a fire. Oxygen is one of the most chemically active substances on Earth, and though we need it to survive, it can ravage our bodies. The oxygen increases the reactions causing the heart attack in the first place; it tears up more cells and overwhelms the virtual suspended animation that the body-produced hydrogen sulfide created. Then it kills you.

Perhaps our first instinct in instances of a heart attack should be to cool the body and let hydrogen sulfide do its natural work. To save life, in other words, you may first have to effectively suspend it with hydrogen sulfide. This tactic may just be what got us so far in the first place.

There is no clear understanding yet of why our injured bodies are able to produce hydrogen sulfide or why H2S puts some mammals into suspended animation. But I believe that Roth has found our body's own memory of the ancient events that nearly killed our distant ancestors. Some proto-mammals may have been exposed to H2S, and instead of dying, they were placed into a state of suspended animation that allowed them to survive until the initial hydrogen sulfide levels subsided and they were reanimated. Some lucky evolutionary accident ensured the mammals' safety through a deep sleep, and that accident may still be dormant within us. That which allowed our ancestors to survive millions of years ago might also be a means of our survival now.

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Seed: Suspending Life

 

Sunday, April 13, 2008

Biologists find first lungless frog

 

Biologists have found the first recorded species of frog that breathes without lungs in a clear, cold-water stream on the island of Borneo in Indonesia.

According to a report in National Geographic News, the frog, named “Barbourula kalimantanensis”, gets all its oxygen through its skin.

“Nobody knew about the lunglessness before we accidentally discovered it doing routine dissections,” said David Bickford, a biologist at the National University of Singapore.

Biologists find first lungless frog

Friday, April 11, 2008

Worm Turns Cricket Into Zombie!

 

 

What does this say about the ability to induce behavior?  Proteomics has many surprises I think

 

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Friday, April 4, 2008

BBC NEWS | Health | Daily caffeine 'protects brain'

 

Coffee may cut the risk of dementia by blocking the damage cholesterol can inflict on the body, research suggests.

The drink has already been linked to a lower risk of Alzheimer's Disease, and a study by a US team for the Journal of Neuroinflammation may explain why.

BBC NEWS | Health | Daily caffeine 'protects brain'

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Thursday, April 3, 2008

Blue Brain Out-Thinks Its Critics

 

We first posted about the Blue Brain Project back in 2005. The idea was to use massive computing power to accurately simulate enough biological neurons to reproduce part of a mammal brain's functionality. The project was widely criticized as "ridiculous". With the recent successful conclusion of the project's first phase, critics who claimed the project was "bound to fail" have been effectively proven wrong. The current system accurately reproduces the neocortical column of a two-week old rat, composed of 10,000 neurons with 30 types of ion channels and 30 million interconnections. Surprisingly, at least to the critics, the computational structure does what the biological structure does even at the level of individual neurons. But don't get too excited yet, the researchers believe reproducing an entire Human brain would require processing over 500 petabytes of data. A computer like that is 10 years away if Moore's law continues to hold. To build it using today's processors would result in a brain that costs $3 billion per year in electricity to operate (versus our meat brains that need only 25 watts!) Meanwhile, SEED magazine has an article about the recent achievements of the Blue Brain and the conscious entities blog has written some thoughtful commentary about the project.

Blue Brain Out-Thinks Its Critics

 

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Tiny Brain-Like Computer Created - Yahoo! News

 

The most powerful computer known is the brain, and now scientists have designed a machine just a few molecules large that mimics how the brain works.

So far the device can simultaneously carry out 16 times more operations than a normal computer transistor. Researchers suggest the invention might eventually prove able to perform roughly 1,000 times more operations than a transistor.

The device is made of a compound known as duroquinone. This molecule resembles a hexagonal plate with four cones linked to it, "like a small car," explained researcher Anirban Bandyopadhyay, an artificial intelligence and molecular electronics scientist at the National Institute for Materials Science at Tsukuba in Japan. Duroquinone is less than a nanometer, or a billionth of a meter large. This makes it hundreds of times smaller than a wavelength of visible light. The machine is made of 17 duroquinone molecules. One molecule sits at the center of a ring formed by the remaining 16. The entire invention sits on a surface of gold.

Tiny Brain-Like Computer Created - Yahoo! News

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